CSDE1 protein (Ursus maritimus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

Experiments

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[Homology]

Score

CSDE1

Cold shock domain-containing protein E1 isoform X2. (756 aa)

Predicted Functional Partners:

ITSN2

0.802

ITSN1

0.698

ENSUMAP00000027695

0.698

PRRC2C

0.653

NF1

0.650

RASA1

0.637

UBAP2L

0.598

MET

0.596

MST1R

0.593

PIK3CA

0.588

Your Current Organism:

Ursus maritimus

NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CSDE1	ENSUMAP00000027695	ENSUMAP00000013140	ENSUMAP00000027695	Cold shock domain-containing protein E1 isoform X2.	annotation not available	0.698
CSDE1	ITSN1	ENSUMAP00000013140	ENSUMAP00000027675	Cold shock domain-containing protein E1 isoform X2.	Intersectin-1 isoform X2.	0.698
CSDE1	ITSN2	ENSUMAP00000013140	ENSUMAP00000031617	Cold shock domain-containing protein E1 isoform X2.	LOW QUALITY PROTEIN: intersectin-2.	0.802
CSDE1	MET	ENSUMAP00000013140	ENSUMAP00000003395	Cold shock domain-containing protein E1 isoform X2.	Hepatocyte growth factor receptor.	0.596
CSDE1	MST1R	ENSUMAP00000013140	ENSUMAP00000030635	Cold shock domain-containing protein E1 isoform X2.	Macrophage-stimulating protein receptor.	0.593
CSDE1	NF1	ENSUMAP00000013140	ENSUMAP00000020543	Cold shock domain-containing protein E1 isoform X2.	Neurofibromin.	0.650
CSDE1	PIK3CA	ENSUMAP00000013140	ENSUMAP00000010426	Cold shock domain-containing protein E1 isoform X2.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.588
CSDE1	PRRC2C	ENSUMAP00000013140	ENSUMAP00000024506	Cold shock domain-containing protein E1 isoform X2.	Proline rich coiled-coil 2C.	0.653
CSDE1	RASA1	ENSUMAP00000013140	ENSUMAP00000006721	Cold shock domain-containing protein E1 isoform X2.	Ras GTPase-activating protein 1.	0.637
CSDE1	UBAP2L	ENSUMAP00000013140	ENSUMAP00000027735	Cold shock domain-containing protein E1 isoform X2.	Ubiquitin-associated protein 2-like isoform X1.	0.598
ENSUMAP00000027695	CSDE1	ENSUMAP00000027695	ENSUMAP00000013140	annotation not available	Cold shock domain-containing protein E1 isoform X2.	0.698
ENSUMAP00000027695	ITSN1	ENSUMAP00000027695	ENSUMAP00000027675	annotation not available	Intersectin-1 isoform X2.	0.955
ENSUMAP00000027695	ITSN2	ENSUMAP00000027695	ENSUMAP00000031617	annotation not available	LOW QUALITY PROTEIN: intersectin-2.	0.942
ITSN1	CSDE1	ENSUMAP00000027675	ENSUMAP00000013140	Intersectin-1 isoform X2.	Cold shock domain-containing protein E1 isoform X2.	0.698
ITSN1	ENSUMAP00000027695	ENSUMAP00000027675	ENSUMAP00000027695	Intersectin-1 isoform X2.	annotation not available	0.955
ITSN1	ITSN2	ENSUMAP00000027675	ENSUMAP00000031617	Intersectin-1 isoform X2.	LOW QUALITY PROTEIN: intersectin-2.	0.943
ITSN2	CSDE1	ENSUMAP00000031617	ENSUMAP00000013140	LOW QUALITY PROTEIN: intersectin-2.	Cold shock domain-containing protein E1 isoform X2.	0.802
ITSN2	ENSUMAP00000027695	ENSUMAP00000031617	ENSUMAP00000027695	LOW QUALITY PROTEIN: intersectin-2.	annotation not available	0.942
ITSN2	ITSN1	ENSUMAP00000031617	ENSUMAP00000027675	LOW QUALITY PROTEIN: intersectin-2.	Intersectin-1 isoform X2.	0.943
ITSN2	MET	ENSUMAP00000031617	ENSUMAP00000003395	LOW QUALITY PROTEIN: intersectin-2.	Hepatocyte growth factor receptor.	0.668