STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHD1Lchromodomain-helicase-DNA-binding protein 1-like isoform X1. (901 aa)    
Predicted Functional Partners:
XPA
DNA repair protein complementing XP-A cells.
    
 0.939
ENSUMAP00000026525
annotation not available
 
 
 0.862
PARP1
Poly [ADP-ribose] polymerase.
   
 0.841
LOC103657553
LOW QUALITY PROTEIN: DNA repair protein complementing XP-G cells-like.
   
 0.831
ENSUMAP00000031332
annotation not available
   
 0.831
BAZ1B
Tyrosine-protein kinase BAZ1B.
    
 0.772
PARP2
Poly [ADP-ribose] polymerase.
   
 0.736
BPTF
Nucleosome-remodeling factor subunit BPTF.
   
 
 0.735
POLE3
DNA polymerase epsilon 3, accessory subunit.
    
 0.705
XRCC1
LOW QUALITY PROTEIN: DNA repair protein XRCC1.
    
 0.704
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.