STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM47Tripartite motif-containing protein 47 isoform X1. (436 aa)    
Predicted Functional Partners:
TRIM42
Tripartite motif-containing protein 42.
    
 
 0.779
TRIM37
E3 ubiquitin-protein ligase TRIM37 isoform X3.
    
 
 0.771
TRIM59
Tripartite motif-containing protein 59.
      
 0.764
TRIM69
E3 ubiquitin-protein ligase TRIM69-like.
      
 0.757
TRIM66
Tripartite motif-containing protein 66.
      
 0.735
TRIM15
Tripartite motif-containing protein 15.
      
 0.721
TRIM23
E3 ubiquitin-protein ligase TRIM23.
    
 0.673
DDX58
Probable ATP-dependent RNA helicase DDX58 isoform X1.
   
 0.667
TRIM54
Tripartite motif-containing protein 54.
      
 0.654
IFIH1
Interferon-induced helicase C domain-containing protein 1 isoform X1.
   
 0.561
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.