STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ILRUNLOW QUALITY PROTEIN: uncharacterized protein C6orf106 homolog. (207 aa)    
Predicted Functional Partners:
SHQ1
LOW QUALITY PROTEIN: protein SHQ1 homolog.
      
 0.598
DPH6
Diphthine--ammonia ligase; Amidase that catalyzes the last step of diphthamide biosynthesis using ammonium and ATP.
      
 0.597
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
 0.597
UHRF1BP1
UHRF1-binding protein 1.
      
 0.577
GSAP
Gamma-secretase-activating protein.
   
 0.577
SQSTM1
Sequestosome-1.
   
 0.577
NBR1
Next to BRCA1 gene 1 protein isoform X1.
   
 0.577
MAP1LC3B
Microtubule-associated proteins 1A/1B light chain 3B.
    
 0.554
ENSUMAP00000015908
annotation not available
    
 0.554
ENSUMAP00000015992
annotation not available
    
 0.554
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.