STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAGR1PAXIP1-associated glutamate-rich protein 1. (254 aa)    
Predicted Functional Partners:
PAXIP1
PAX-interacting protein 1.
    
 0.866
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.799
NCOA6
Nuclear receptor coactivator 6 isoform X1.
    
 0.798
KDM6A
Lysine-specific demethylase 6A.
    
 0.798
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.789
KIF22
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.777
PDXDC1
Pyridoxal-dependent decarboxylase domain-containing protein 1.
      
 0.771
TUBGCP4
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.766
INO80E
INO80 complex subunit E isoform X1.
    
 0.758
WDR5
COMPASS component SWD3.
    
 0.741
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.