STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRDTBromodomain testis-specific protein. (918 aa)    
Predicted Functional Partners:
BRD4
Bromodomain-containing protein 4 isoform X2.
  
 
 
0.806
BRD3
Bromodomain-containing protein 3.
  
   
0.794
CDK9
Cyclin-dependent kinase 9.
   
 
 0.687
BRD2
Bromodomain-containing protein 2 isoform X2.
  
 
 
0.681
ENSUMAP00000017266
annotation not available
    
 
0.674
NSD3
Histone-lysine N-methyltransferase NSD3 isoform X2.
   
 
 0.667
CCNT1
cyclin-T1 isoform X1; Belongs to the cyclin family.
   
 
 0.641
TAF7
Transcription initiation factor TFIID subunit 7.
    
 
 0.621
CHD5
chromodomain-helicase-DNA-binding protein 5.
   
 
 0.595
PMFBP1
Polyamine modulated factor 1 binding protein 1.
    
 
 0.575
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.