STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTX3Pentraxin-related protein PTX3. (202 aa)    
Predicted Functional Partners:
TNFAIP6
Tumor necrosis factor-inducible gene 6 protein.
   
 
 0.760
AMBP
Protein AMBP.
      
 0.750
FGF2
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
    
 
 0.670
CFH
Complement factor H.
    
 
 0.584
HAS2
Hyaluronan synthase 2 isoform X1.
   
  
 0.578
IL6
Interleukin-6.
   
  
 0.572
MBL2
Mannose-binding protein C.
   
 
 0.553
SORD
Sorbitol dehydrogenase.
      
 0.499
FGF23
Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.
    
 
 0.487
SERPINE1
Plasminogen activator inhibitor 1; Belongs to the serpin family.
   
  
 0.473
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.