STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC62SEC62 homolog, preprotein translocation factor. (399 aa)    
Predicted Functional Partners:
SEC63
SEC63 homolog, protein translocation regulator.
   
 0.999
OXSR1
Oxidative stress responsive kinase 1.
    
 
 0.857
SEC61G
Protein transport protein Sec61 subunit gamma.
    
 
 0.857
STK39
STE20/SPS1-related proline-alanine-rich protein kinase.
    
 
 0.857
ENSUMAP00000022160
annotation not available
    
 
 0.857
ENSUMAP00000017907
annotation not available
   
 
 0.814
SEC61A2
Protein transport protein SEC61 subunit alpha.
   
 
 0.814
SEC61A1
Protein transport protein Sec61 subunit alpha isoform 1.
   
 
 0.814
STRADA
STE20-related kinase adapter protein alpha isoform X1.
    
 
 0.761
STRADB
STE20-related kinase adapter protein beta.
    
 
 0.761
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.