STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUMAP00000016091annotation not available (68 aa)    
Predicted Functional Partners:
SNIP1
Smad nuclear-interacting protein 1.
   
 0.984
BUD13
BUD13 homolog.
   
 0.984
PHF5A
PHD finger-like domain-containing protein 5A.
    
 
 0.912
CWC27
Peptidyl-prolyl cis-trans isomerase CWC27 homolog.
   
 0.844
SF3B1
Splicing factor 3B subunit 1 isoform X1.
    
 
 0.843
SRRM2
Serine/arginine repetitive matrix protein 2 isoform X1.
   
 
 0.842
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 
 0.842
SF3A2
Splicing factor 3A subunit 2.
    
 
 0.839
SNW1
SNW domain-containing protein 1.
    
 
 0.838
SF3B2
Splicing factor 3B subunit 2 isoform X2.
    
 
 0.837
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.