STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103665519SLA class II histocompatibility antigen, DQ haplotype D alpha chain; Belongs to the MHC class II family. (255 aa)    
Predicted Functional Partners:
CD74
LOW QUALITY PROTEIN: HLA class II histocompatibility antigen gamma chain.
   
 0.994
CD4
T-cell surface glycoprotein CD4.
     
 0.962
CD247
T-cell surface glycoprotein CD3 zeta chain isoform X1.
   
 
 0.955
HLA-DRA
HLA class II histocompatibility antigen, DR alpha chain; Belongs to the MHC class II family.
  
 
0.948
HLA-DOB
HLA class II histocompatibility antigen, DO beta chain isoform X1.
   
0.929
LOC103665517
DLA class II histocompatibility antigen, DR-1 beta chain-like.
   
0.920
HLA-DQB1
boLa class II histocompatibility antigen, DQB*0101 beta chain-like.
   
0.920
LOC103665521
DLA class II histocompatibility antigen, DR-1 beta chain.
   
0.920
HLA-DMA
HLA class II histocompatibility antigen, DM alpha chain; Belongs to the MHC class II family.
  
0.873
LOC103665509
HLA class II histocompatibility antigen, DM beta chain.
   
0.869
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
Server load: low (24%) [HD]