STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SARS1serine--tRNA ligase, cytoplasmic. (513 aa)    
Predicted Functional Partners:
PSTK
L-seryl-tRNA(Sec) kinase.
     
 0.963
GARS1
glycine--tRNA ligase.
   
  
 0.949
SARS2
serine--tRNA ligase, mitochondrial.
  
  
 
0.908
RHEBL1
GTPase RhebL1 isoform X3.
 
      0.897
YARS1
Tyrosine--tRNA ligase.
  
  
 0.853
SUPT3H
Transcription initiation protein SPT3 homolog isoform X2.
    
 
 0.837
TADA2A
Transcriptional adapter.
    
 
 0.829
SGF29
SAGA-associated factor 29 homolog.
    
 
 0.826
TAF9B
Transcription initiation factor TFIID subunit 9B.
    
 
 0.814
TAF12
Transcription initiation factor TFIID subunit 12.
    
 
 0.813
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.