STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB25Zinc finger and BTB domain-containing protein 25 isoform X1. (435 aa)    
Predicted Functional Partners:
KPNA6
Importin subunit alpha; Functions in nuclear protein import.
   
 0.793
USHBP1
Usher syndrome type-1C protein-binding protein 1.
      
 0.771
GMCL1
Germ cell-less protein-like 1.
      
 0.739
PIP4P1
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
    
 
 0.732
KPNA1
Importin subunit alpha; Functions in nuclear protein import.
   
 0.670
ENSUMAP00000031696
annotation not available
      
 0.581
LOC103680128
Germ cell-less protein-like 1.
      
 0.546
LOC103680494
Putative germ cell-less protein-like 1-like.
      
 0.546
KCTD9
Potassium channel tetramerization domain containing 9.
      
 0.543
ARHGAP12
Rho GTPase-activating protein 12 isoform X3.
     
 0.529
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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