STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATRSerine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (2637 aa)    
Predicted Functional Partners:
CHEK1
Serine/threonine-protein kinase Chk1 isoform X2; Belongs to the protein kinase superfamily.
    
 0.998
ATM
Serine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...]
   
0.998
ATRIP
LOW QUALITY PROTEIN: ATR-interacting protein.
    
 0.996
CHEK2
Serine/threonine-protein kinase Chk2 isoform X2.
    
 0.994
WRN
LOW QUALITY PROTEIN: Werner syndrome ATP-dependent helicase.
   
 0.992
FANCM
LOW QUALITY PROTEIN: Fanconi anemia group M protein.
   
 0.990
ENSUMAP00000000566
annotation not available
    
 0.983
RAD1
Cell cycle checkpoint protein RAD1.
    
 0.982
CDC7
LOW QUALITY PROTEIN: cell division cycle 7-related protein kinase.
    
 0.981
HUS1
Checkpoint protein; Belongs to the HUS1 family.
   
 0.981
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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