Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HPGDS | PRXL2B | ENSUMAP00000005775 | ENSUMAP00000014200 | Hematopoietic prostaglandin D synthase. | Prostamide/prostaglandin F synthase. | 0.933 |
HPGDS | PTGES | ENSUMAP00000005775 | ENSUMAP00000027846 | Hematopoietic prostaglandin D synthase. | Prostaglandin E synthase. | 0.943 |
HPGDS | PTGES2 | ENSUMAP00000005775 | ENSUMAP00000031472 | Hematopoietic prostaglandin D synthase. | Prostaglandin E synthase 2. | 0.942 |
HPGDS | PTGES3 | ENSUMAP00000005775 | ENSUMAP00000024361 | Hematopoietic prostaglandin D synthase. | Prostaglandin E synthase 3. | 0.938 |
HPGDS | PTGS1 | ENSUMAP00000005775 | ENSUMAP00000004225 | Hematopoietic prostaglandin D synthase. | Prostaglandin-endoperoxide synthase 1. | 0.943 |
HPGDS | PTGS2 | ENSUMAP00000005775 | ENSUMAP00000028448 | Hematopoietic prostaglandin D synthase. | Prostaglandin-endoperoxide synthase 2. | 0.924 |
HPGDS | TBXAS1 | ENSUMAP00000005775 | ENSUMAP00000020646 | Hematopoietic prostaglandin D synthase. | thromboxane-A synthase. | 0.943 |
MED17 | MED30 | ENSUMAP00000009104 | ENSUMAP00000028210 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 30. | 0.999 |
MED17 | TBXAS1 | ENSUMAP00000009104 | ENSUMAP00000020646 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | thromboxane-A synthase. | 0.712 |
MED30 | MED17 | ENSUMAP00000028210 | ENSUMAP00000009104 | Mediator of RNA polymerase II transcription subunit 30. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.999 |
MED30 | TBXAS1 | ENSUMAP00000028210 | ENSUMAP00000020646 | Mediator of RNA polymerase II transcription subunit 30. | thromboxane-A synthase. | 0.725 |
PRXL2B | HPGDS | ENSUMAP00000014200 | ENSUMAP00000005775 | Prostamide/prostaglandin F synthase. | Hematopoietic prostaglandin D synthase. | 0.933 |
PRXL2B | PTGES | ENSUMAP00000014200 | ENSUMAP00000027846 | Prostamide/prostaglandin F synthase. | Prostaglandin E synthase. | 0.919 |
PRXL2B | PTGES2 | ENSUMAP00000014200 | ENSUMAP00000031472 | Prostamide/prostaglandin F synthase. | Prostaglandin E synthase 2. | 0.907 |
PRXL2B | PTGES3 | ENSUMAP00000014200 | ENSUMAP00000024361 | Prostamide/prostaglandin F synthase. | Prostaglandin E synthase 3. | 0.900 |
PRXL2B | PTGS1 | ENSUMAP00000014200 | ENSUMAP00000004225 | Prostamide/prostaglandin F synthase. | Prostaglandin-endoperoxide synthase 1. | 0.910 |
PRXL2B | PTGS2 | ENSUMAP00000014200 | ENSUMAP00000028448 | Prostamide/prostaglandin F synthase. | Prostaglandin-endoperoxide synthase 2. | 0.917 |
PRXL2B | TBXAS1 | ENSUMAP00000014200 | ENSUMAP00000020646 | Prostamide/prostaglandin F synthase. | thromboxane-A synthase. | 0.902 |
PTGES | HPGDS | ENSUMAP00000027846 | ENSUMAP00000005775 | Prostaglandin E synthase. | Hematopoietic prostaglandin D synthase. | 0.943 |
PTGES | PRXL2B | ENSUMAP00000027846 | ENSUMAP00000014200 | Prostaglandin E synthase. | Prostamide/prostaglandin F synthase. | 0.919 |
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