STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103661076Homeobox protein Hox-B8-like. (134 aa)    
Predicted Functional Partners:
HOXB7
Homeobox protein Hox-B7.
   
 
0.814
HOXB5
Homeobox protein Hox-B5.
   
  
0.789
RTF2
Replication termination factor 2.
      
 0.637
PBX3
LOW QUALITY PROTEIN: pre-B-cell leukemia transcription factor 3.
    
 0.526
PBX1
LOW QUALITY PROTEIN: pre-B-cell leukemia transcription factor 1.
    
 0.526
PBX3-2
Pre-B-cell leukemia transcription factor 3.
    
 0.526
PBX4
pre-B-cell leukemia transcription factor 4.
    
 0.523
ENSUMAP00000012561
annotation not available
    
 0.523
PBX2
pre-B-cell leukemia transcription factor 2.
    
 0.523
SLITRK5
SLIT and NTRK-like protein 5.
    
 
 0.523
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.