STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF1CLOW QUALITY PROTEIN: TATA box-binding protein-associated factor RNA polymerase I subunit C. (749 aa)    
Predicted Functional Partners:
TAF1B
TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1.
    
 0.992
TAF1D
TATA-box binding protein associated factor, RNA polymerase I subunit D.
    
 0.987
TAF1A
TATA box-binding protein-associated factor RNA polymerase I subunit A.
  
 
 0.968
TBP
TATA-box-binding protein.
    
 0.951
RRN3
RNA polymerase I-specific transcription initiation factor RRN3.
    
 0.922
TBPL2
TATA box-binding protein-like protein 2.
    
 0.778
AHCTF1
Protein ELYS isoform X1.
      
 0.742
TWISTNB
DNA-directed RNA polymerase I subunit RPA43.
     
 0.732
SPC24
SPC24 component of NDC80 kinetochore complex.
      
 0.722
POLR1A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.718
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
Server load: low (24%) [HD]