STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DENND4CLOW QUALITY PROTEIN: DENN domain-containing protein 4C. (1931 aa)    
Predicted Functional Partners:
ANKFY1
Ankyrin repeat and FYVE domain-containing protein 1.
     
 0.814
MINDY1
MINDY lysine 48 deubiquitinase 1.
      
 0.776
WHAMM
WASP homolog-associated protein with actin, membranes and microtubules.
      
 0.769
DENND5A
DENN domain-containing protein 5A.
    
0.745
RAB10
RAB10, member RAS oncogene family.
    
 0.669
AVL9
Late secretory pathway protein AVL9 homolog.
      
 0.644
RAB8A
RAB8A, member RAS oncogene family.
    
 0.604
RAB8B
Ras-related protein Rab-8B.
    
 0.604
RIC1
Protein RIC1 homolog isoform X1.
      
 0.603
VMP1
Vacuole membrane protein 1 isoform X1.
      
 0.603
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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