STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFX3Transcription factor RFX3 isoform X1. (749 aa)    
Predicted Functional Partners:
ATR
Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family.
    
 
 0.674
STRC
Stereocilin.
      
 0.550
CHEK2
Serine/threonine-protein kinase Chk2 isoform X2.
   
 
 0.545
LOC103681235
Olfactory receptor.
      
 0.540
CDKAL1
Threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1.
      
 0.521
BCO2
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial isoform X1.
      
 0.518
TMEM117
Transmembrane protein 117 isoform X1.
      
 0.518
NAALADL2
Inactive N-acetylated-alpha-linked acidic dipeptidase-like protein 2 isoform X1.
      
 0.516
KBTBD12
Kelch repeat and BTB domain-containing protein 12.
      
 0.510
RFXAP
Regulatory factor X-associated protein.
    
 
 0.485
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.