STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYPL1Synaptophysin-like protein 1. (250 aa)    
Predicted Functional Partners:
TUBGCP2
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.601
TMED5
Transmembrane emp24 domain-containing protein 5 isoform X1.
      
 0.597
TDRD7
Tudor domain-containing protein 7 isoform X1.
      
 0.519
NFASC
Neurofascin isoform X2.
   
 
 0.518
VAMP2
Vesicle-associated membrane protein 2.
   
 0.517
SGMS2
Phosphatidylcholine:ceramide cholinephosphotransferase 2.
      
 0.516
ORC5
Origin recognition complex subunit 5 isoform X1.
      
 0.516
SENP5
Sentrin-specific protease 5 isoform X2.
   
  
 0.503
VAMP1
Vesicle-associated membrane protein 1 isoform X1.
   
 0.500
LGSN
Lengsin; Belongs to the glutamine synthetase family.
      
 0.491
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.