STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC30Leucine-rich repeat-containing protein 30. (301 aa)    
Predicted Functional Partners:
ATP1B4
Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.
   
  
 0.824
SLC12A7
Solute carrier family 12 member 7.
      
 0.772
ELF4
LOW QUALITY PROTEIN: ETS-related transcription factor Elf-4.
      
 0.762
CDNF
Cerebral dopamine neurotrophic factor isoform X1.
   
    0.695
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
   
    0.693
ADGRL1
Latrophilin-1; Belongs to the G-protein coupled receptor 2 family.
    
   0.692
ADGRL2
Latrophilin-2; Belongs to the G-protein coupled receptor 2 family.
    
   0.692
ADGRL3
Latrophilin-3; Belongs to the G-protein coupled receptor 2 family.
    
   0.692
ACSS2
Acetyl-coenzyme A synthetase, cytoplasmic isoform X1.
      
 0.601
LRRC20
Leucine-rich repeat-containing protein 20 isoform X5.
  
   
 0.598
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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