STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VRK2Serine/threonine-protein kinase VRK2 isoform X1. (494 aa)    
Predicted Functional Partners:
ANKLE2
Ankyrin repeat and LEM domain-containing protein 2.
   
 0.875
LTV1
LTV1 ribosome biogenesis factor.
    
 0.767
BANF1
Barrier-to-autointegration factor isoform X2.
    
 0.766
RHOD
Rho-related GTP-binding protein RhoD.
   
 0.758
BYSL
Bystin.
    
 0.695
RIOK2
Serine/threonine-protein kinase RIO2.
    
 0.664
TSR1
pre-rRNA-processing protein TSR1 homolog.
    
 0.617
BANF2
Barrier-to-autointegration factor-like protein.
    
 0.605
ZNF804A
LOW QUALITY PROTEIN: zinc finger protein 804A.
      
 0.599
TSNARE1
t-SNARE domain-containing protein 1.
      
 0.598
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.