STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGR1Prostaglandin reductase 1. (329 aa)    
Predicted Functional Partners:
MGAT4B
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B.
      
 0.647
ARHGAP19
Rho GTPase-activating protein 19 isoform X1.
      
 0.579
BPIFB2
BPI fold-containing family B member 2.
      
 0.563
EPHX1
Epoxide hydrolase 1.
   
  
 0.557
ACTL7A
Actin-like protein 7A; Belongs to the actin family.
      
 0.547
PRPF4B
Serine/threonine-protein kinase PRP4 homolog isoform X1.
      
 0.529
FADS1
Fatty acid desaturase 1.
      
 0.520
PTGES
Prostaglandin E synthase.
   
  
 0.520
FREM1
FRAS1-related extracellular matrix protein 1.
      
 0.514
NXN
Nucleoredoxin.
      
 0.513
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.