STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGLY1peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase. (626 aa)    
Predicted Functional Partners:
RAD23B
LOW QUALITY PROTEIN: UV excision repair protein RAD23 homolog B.
    
 0.980
AMFR
E3 ubiquitin-protein ligase AMFR.
   
 0.948
UBXN1
UBX domain-containing protein 1 isoform X1.
    
 0.940
DERL1
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
    
 0.940
RAD23A
UV excision repair protein RAD23 homolog A.
    
 0.931
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.900
VCP
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
    
 0.870
PSMC1
LOW QUALITY PROTEIN: 26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
    
 0.848
ENSUMAP00000030720
annotation not available
    
 0.848
CCDC12
Coiled-coil domain-containing protein 12.
      
 0.800
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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