STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBD6methyl-CpG-binding domain protein 6. (984 aa)    
Predicted Functional Partners:
UNC79
LOW QUALITY PROTEIN: protein unc-79 homolog.
    
 0.705
ASXL2
LOW QUALITY PROTEIN: putative Polycomb group protein ASXL2.
   
 0.640
BAP1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.599
RBM44
LOW QUALITY PROTEIN: RNA-binding protein 44.
      
 0.523
KDM1B
Lysine-specific histone demethylase 1B isoform X1.
    
 0.514
HSF2
Heat shock factor protein 2 isoform X1.
    
 
 0.476
ACRBP
Acrosin-binding protein.
  
     0.468
MBD3L1
methyl-CpG-binding domain protein 3-like 1.
    
 
 0.467
HCFC2
Host cell factor C2.
   
 0.460
BSN
LOW QUALITY PROTEIN: protein bassoon.
     
 0.449
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.