STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM118AFamily with sequence similarity 118 member A. (388 aa)    
Predicted Functional Partners:
RHBDD3
LOW QUALITY PROTEIN: rhomboid domain-containing protein 3.
    
 
 0.825
LETM2
Leucine zipper and EF-hand containing transmembrane protein 2.
    
 
 0.792
DNAJC18
DnaJ heat shock protein family (Hsp40) member C18.
   
 0.790
TMEM39B
Transmembrane protein 39B.
      
 0.787
TTC38
Tetratricopeptide repeat protein 38.
      
 0.770
TRMU
LOW QUALITY PROTEIN: mitochondrial tRNA-specific 2-thiouridylase 1.
    
 0.720
GPAT2
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
      
 0.716
BBS9
Protein PTHB1 isoform X1.
    
 0.702
LAPTM4A
Lysosomal-associated transmembrane protein 4A.
   
  
 0.647
FILIP1L
Filamin A-interacting protein 1-like.
    
 0.601
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.