STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC27A3Long-chain fatty acid transport protein 3. (527 aa)    
Predicted Functional Partners:
BBS1
Bardet-Biedl syndrome 1 protein.
   
 0.763
BBS9
Protein PTHB1 isoform X1.
   
 0.760
BBS7
Bardet-Biedl syndrome 7 protein.
   
 0.756
TTC8
Tetratricopeptide repeat protein 8 isoform X1.
   
 0.731
ACP6
LOW QUALITY PROTEIN: lysophosphatidic acid phosphatase type 6; Belongs to the histidine acid phosphatase family.
      
 0.646
BBS4
Bardet-Biedl syndrome 4 protein isoform X2.
   
 0.612
ENSUMAP00000010549
annotation not available
   
 0.612
SLC7A1
High affinity cationic amino acid transporter 1.
    
 
 0.587
SCP2
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.555
LZTFL1
Leucine zipper transcription factor-like protein 1 isoform X1.
   
 0.530
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
Server load: low (24%) [HD]