STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEMD3Inner nuclear membrane protein Man1. (706 aa)    
Predicted Functional Partners:
SMAD1
Mothers against decapentaplegic homolog.
   
 
 0.838
SMAD2
Mothers against decapentaplegic homolog.
   
 
 0.775
SMAD3
Mothers against decapentaplegic homolog.
   
 
 0.775
EMILIN2
EMILIN-2.
      
 0.774
TMBIM4
Protein lifeguard 4; Belongs to the BI1 family.
      
 0.756
CDC5L
Cell division cycle 5-like protein isoform X2.
   
 
 0.752
ZNF19
Zinc finger protein 19 isoform X2.
    
 
 0.738
BANF1
Barrier-to-autointegration factor isoform X2.
   
 0.732
WIF1
Wnt inhibitory factor 1.
      
 0.719
BANF2
Barrier-to-autointegration factor-like protein.
   
 0.703
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.