STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYPD6Bly6/PLAUR domain-containing protein 6B. (194 aa)    
Predicted Functional Partners:
BEND7
BEN domain-containing protein 7.
      
 0.853
RPS6KC1
Ribosomal protein S6 kinase delta-1.
   
 
 0.838
ANGEL2
Protein angel homolog 2 isoform X1.
      
 0.786
TATDN3
Putative deoxyribonuclease TATDN3 isoform X2.
      
 0.786
KATNAL2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.785
OTOL1
Otolin-1.
      
 0.771
GTDC1
Glycosyltransferase-like domain-containing protein 1 isoform X2.
      
 0.729
MMADHC
Methylmalonic aciduria and homocystinuria type D protein, mitochondrial.
      
 0.724
MBD5
methyl-CpG-binding domain protein 5 isoform X2.
   
 0.712
ST8SIA5
LOW QUALITY PROTEIN: alpha-2,8-sialyltransferase 8E; Belongs to the glycosyltransferase 29 family.
      
 0.704
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.