STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTULINLOTU deubiquitinase with linear linkage specificity like. (327 aa)    
Predicted Functional Partners:
TMEM63C
Calcium permeable stress-gated cation channel 1.
      
 0.770
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
  0.687
FRMPD4
FERM and PDZ domain-containing protein 4.
      
 0.646
EVI2B
Ecotropic viral integration site 2B.
      
 0.623
ENSUMAP00000006417
annotation not available
    
 0.612
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.612
RNF216
E3 ubiquitin-protein ligase RNF216.
    
 0.513
RNF31
E3 ubiquitin-protein ligase RNF31 isoform X1.
    
 0.513
IRF9
Interferon regulatory factor 9 isoform X1.
    
 0.513
ARIH2
RBR-type E3 ubiquitin transferase.
    
 0.513
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.