STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC127Coiled-coil domain-containing protein 127. (280 aa)    
Predicted Functional Partners:
FAM104B
Family with sequence similarity 104 member B.
      
 0.897
SUPT7L
SPT7 like, STAGA complex gamma subunit.
   
  
 0.868
MTO1
Protein MTO1 homolog, mitochondrial isoform X1.
      
 0.859
ASB7
Ankyrin repeat and SOCS box containing 7.
      
 0.825
TADA2B
Transcriptional adapter 2-beta.
      
 0.737
CNOT10
CCR4-NOT transcription complex subunit 10.
      
 0.722
CFAP61
Uncharacterized protein C20orf26 homolog.
      
 0.695
ATP6V1FNB
ATP6V1F neighbor.
      
 0.687
CST11
Cystatin-11.
      
 0.666
HOGA1
4-hydroxy-2-oxoglutarate aldolase, mitochondrial isoform X1; Belongs to the DapA family.
      
 0.637
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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