STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFATC4LOW QUALITY PROTEIN: nuclear factor of activated T-cells, cytoplasmic 4. (787 aa)    
Predicted Functional Partners:
PPP3R1
Calcineurin subunit B type 1.
    
 0.932
GATA4
Transcription factor GATA-4.
     
 0.932
PPP3CA
Serine/threonine-protein phosphatase.
   
 0.925
PPP3CC
Serine/threonine-protein phosphatase.
   
 0.918
PPP3CB
Serine/threonine-protein phosphatase.
   
 0.917
SRF
Serum response factor.
     
 0.909
NFATC3
Nuclear factor of activated T-cells, cytoplasmic 3.
  
 
0.908
NFATC2
Nuclear factor of activated T-cells, cytoplasmic 2.
  
 
0.908
MEF2B
Myocyte-specific enhancer factor 2B isoform X2.
     
 0.905
RPS27A
ubiquitin-40S ribosomal protein S27a.
   
 0.869
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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