STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSMD1CUB and sushi domain-containing protein 1. (3099 aa)    
Predicted Functional Partners:
SH2D4A
SH2 domain-containing protein 4A.
      
 0.602
PHTF2
Putative homeodomain transcription factor 2 isoform X2.
    
 0.496
SHPRH
E3 ubiquitin-protein ligase SHPRH isoform X1.
   
 
 0.464
RIMBP2
RIMS-binding protein 2.
      
 0.448
TSPOAP1
LOW QUALITY PROTEIN: peripheral-type benzodiazepine receptor-associated protein 1.
      
 0.448
ZDHHC8
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.446
POLR3H
DNA-directed RNA polymerase III subunit RPC8 isoform X2.
      
 0.440
MFHAS1
Malignant fibrous histiocytoma-amplified sequence 1.
    
 0.422
SLC38A11
Putative sodium-coupled neutral amino acid transporter 11.
    
 
 0.420
COLGALT2
Procollagen galactosyltransferase 2.
    
 
 0.420
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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