STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH11XLOW QUALITY PROTEIN: protocadherin-11 X-linked. (1113 aa)    
Predicted Functional Partners:
ENSUMAP00000019782
annotation not available
 
      0.865
BRWD3
Bromodomain and WD repeat-containing protein 3.
   
 
 0.518
DIS3L2
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase, such as ZCCHC11/TUT4. Mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. Mediates degradation of uridylated pre-let-7 miRNAs, contributing to the maintenance of embryonic stem (ES) cells. Essential for correct mi [...]
      
 0.517
NSMF
NMDA receptor synaptonuclear signaling and neuronal migration factor.
      
 0.515
CENPI
Centromere protein I.
      
 0.513
SPATA33
Spermatogenesis-associated protein 33.
      
 0.511
IGBP1
Immunoglobulin-binding protein 1 isoform X1.
   
  
 0.459
RUFY1
RUN and FYVE domain-containing protein 1 isoform X1.
      
 0.457
SPRY3
Sprouty RTK signaling antagonist 3.
      
 0.455
PPP1R17
Protein phosphatase 1 regulatory subunit 17.
      
 0.447
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.