STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC45A1Proton-associated sugar transporter A. (739 aa)    
Predicted Functional Partners:
SLC16A8
Solute carrier family 16 member 8.
   
  
 0.780
ANAPC1
LOW QUALITY PROTEIN: anaphase-promoting complex subunit 1.
      
 0.775
PSD2
PH and SEC7 domain-containing protein 2.
   
  
 0.663
OIP5
Protein Mis18-beta isoform X1.
      
 0.646
SMARCC1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1.
   
 
 0.610
RERE
Arginine-glutamic acid dipeptide repeats protein.
      
 0.569
TCHHL1
Trichohyalin-like protein 1.
   
  
 0.534
SLC30A2
Zinc transporter 2.
   
  
 0.534
SLC39A13
LOW QUALITY PROTEIN: zinc transporter ZIP13.
      
 0.532
SLC30A10
Zinc transporter 10.
    
 
 0.531
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.