STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPP6R1LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 6 regulatory subunit 1. (748 aa)    
Predicted Functional Partners:
PPP6C
Serine/threonine-protein phosphatase.
    
 0.921
ANKRD28
Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform X1.
    
 0.919
ANKRD44
Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B isoform X1.
    
 0.820
ANKRD52
Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C.
    
 0.802
NAT14
N-acetyltransferase 14 (putative).
      
 0.717
PPP4C
Serine/threonine-protein phosphatase.
    
 0.690
LRCH3
Leucine-rich repeat and calponin homology domain-containing protein 3 isoform X1.
   
  
 0.666
ISOC2
Isochorismatase domain-containing protein 2, mitochondrial isoform X1.
      
 0.647
PPP3CC
Serine/threonine-protein phosphatase.
    
 0.636
CRLF3
Cytokine receptor-like factor 3.
      
 0.635
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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