STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF133Zinc finger protein 133 isoform X2. (669 aa)    
Predicted Functional Partners:
MAP10
Microtubule-associated protein 10.
      
 0.771
PIAS1
LOW QUALITY PROTEIN: E3 SUMO-protein ligase PIAS1.
    
 0.752
RBBP9
RB binding protein 9, serine hydrolase.
      
 0.742
SLC24A3
Sodium/potassium/calcium exchanger 3 isoform X3; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.725
DZANK1
LOW QUALITY PROTEIN: double zinc ribbon and ankyrin repeat-containing protein 1.
      
 0.658
ENSUMAP00000015439
annotation not available
   
  
 0.645
POLR3F
DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.
     
 0.626
TRIM28
Transcription intermediary factor 1-beta.
   
 0.552
SEC22A
Vesicle-trafficking protein SEC22a isoform X1; Belongs to the synaptobrevin family.
    
 
 0.500
SLC27A2
Very long-chain acyl-CoA synthetase.
      
 0.455
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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