STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABL3RAB, member of RAS oncogene family like 3. (264 aa)    
Predicted Functional Partners:
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha.
    
 
 0.837
RAB3IP
rab-3A-interacting protein.
      
 0.819
RABGEF1
Rab5 GDP/GTP exchange factor isoform X2.
   
 0.789
GTF2E1
General transcription factor IIE subunit 1.
   
  
 0.787
RAB3GAP1
Rab3 GTPase-activating protein catalytic subunit isoform X1.
      
 0.770
RAB24
Ras-related protein Rab-24 isoform X1.
   
  
 0.757
RABL6
Rab-like protein 6.
      
 0.737
RAB3B
RAB3B, member RAS oncogene family.
     
 0.688
RAB39A
RAB39A, member RAS oncogene family.
   
 0.677
SPATA5
Spermatogenesis-associated protein 5.
  
 0.632
Your Current Organism:
Ursus maritimus
NCBI taxonomy Id: 29073
Other names: Thalarctos maritimus, U. maritimus, polar bear, white bear
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.