STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA13Spermatogenesis-associated protein 13 isoform X1. (1246 aa)    
Predicted Functional Partners:
APC
Adenomatous polyposis coli protein.
   
 0.946
ARHGEF4
Rho guanine nucleotide exchange factor 4.
    
 
0.912
APC2
Adenomatous polyposis coli protein 2 isoform X1.
   
 0.902
RAC2
Ras-related C3 botulinum toxin substrate 2 isoform X1.
    
 0.898
RAC1
Ras-related C3 botulinum toxin substrate 1 isoform X1.
    
 0.860
RAC3
Ras-related C3 botulinum toxin substrate 3.
    
 0.860
CDC42
Cell division control protein 42 homolog.
    
 0.778
GABRA2
Gamma-aminobutyric acid receptor subunit alpha-2; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
 0.557
GNB2
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2.
    
 0.516
GNB1
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.
    
 0.516
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.