STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTSL1LOW QUALITY PROTEIN: ADAMTS-like protein 1. (1763 aa)    
Predicted Functional Partners:
POFUT2
GDP-fucose protein O-fucosyltransferase 2.
     
 0.719
B3GLCT
Beta-1,3-glucosyltransferase.
    
 0.716
ADAM30
Disintegrin and metalloproteinase domain-containing protein 30.
      
 0.615
ADAM7
Disintegrin and metalloproteinase domain-containing protein 7.
      
 0.541
TUSC1
Tumor suppressor candidate gene 1 protein.
      
 0.519
C1QTNF7
Complement C1q tumor necrosis factor-related protein 7.
    
 0.509
C1QTNF2
Complement C1q tumor necrosis factor-related protein 2.
    
 0.509
LOC110573097
Disintegrin and metalloproteinase domain-containing protein 2-like.
      
 0.497
ADAM11
Disintegrin and metalloproteinase domain-containing protein 11.
      
 0.487
LOC110575807
Olfactory receptor.
      
 0.473
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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