STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM5Zinc finger protein. (630 aa)    
Predicted Functional Partners:
PRDM8
PR domain zinc finger protein 8.
    
 0.736
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
     
 0.679
KMT5A
N-lysine methyltransferase KMT5A.
   
 0.652
MEDAG
Mesenteric estrogen-dependent adipogenesis protein.
      
 0.615
LOC110579799
SETDB2-PHF11 protein.
   
 0.579
KMT2E
LOW QUALITY PROTEIN: histone-lysine N-methyltransferase 2E.
    
 0.576
SETDB1
Histone-lysine N-methyltransferase SETDB1.
   
 0.570
DOT1L
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
     
 0.555
AK9
Adenylate kinase 9.
    
  0.554
KMT5B
Histone-lysine N-methyltransferase KMT5B isoform X1.
     
 0.546
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.