STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MID1E3 ubiquitin-protein ligase Midline-1 isoform X1. (667 aa)    
Predicted Functional Partners:
IGBP1
Immunoglobulin-binding protein 1 isoform X1.
    
 
 0.638
RTL1
Retrotransposon-like protein 1.
      
 0.537
OSCP1
Protein OSCP1.
      
 0.536
NOL3
Nucleolar protein 3.
      
 0.532
UNC5CL
UNC5C-like protein.
      
 0.523
MID1IP1
Mid1-interacting protein 1.
    
 
 0.510
ARHGEF17
Rho guanine nucleotide exchange factor 17.
    
 0.502
TRAF3IP1
TRAF3-interacting protein 1.
      
 0.481
ARHGEF19
Rho guanine nucleotide exchange factor 19 isoform X1.
      
 0.481
ARHGAP17
Rho GTPase-activating protein 17.
      
 0.473
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.