STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDD4LE3 ubiquitin-protein ligase NEDD4-like. (975 aa)    
Predicted Functional Partners:
SCNN1B
Amiloride-sensitive sodium channel subunit beta; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
    
 0.991
SCNN1A
Amiloride-sensitive sodium channel subunit alpha; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
    
 0.982
SCNN1G
Amiloride-sensitive sodium channel subunit gamma; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
    
 0.979
NEDD4
E3 ubiquitin-protein ligase NEDD4 isoform X1.
    
0.961
SFN
14-3-3 protein sigma; Belongs to the 14-3-3 family.
    
 0.959
SMAD7
Mothers against decapentaplegic homolog.
    
 0.955
LOC110583232
Uncharacterized protein LOC110583232.
    
 0.932
LOC110583655
LOW QUALITY PROTEIN: serine/threonine-protein kinase Sgk1-like.
    
 0.932
AMOT
Angiomotin.
    
 0.911
SMAD2
Mothers against decapentaplegic homolog.
    
 0.882
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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