STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H11AZinc finger CCCH domain-containing protein 11A isoform X1. (816 aa)    
Predicted Functional Partners:
SARNP
SAP domain-containing ribonucleoprotein.
    
 0.977
POLDIP3
Polymerase delta-interacting protein 3 isoform X1.
     
 0.969
CHTOP
Chromatin target of PRMT1 protein isoform X1.
    
 0.968
ASH1L
Histone-lysine N-methyltransferase ASH1L isoform X1.
   
  
 0.840
ALYREF
THO complex subunit 4.
     
 0.825
CASC3
LOW QUALITY PROTEIN: protein CASC3.
     
 0.766
NNT
NAD(P) transhydrogenase, mitochondrial.
      
 0.725
USP34
Ubiquitin carboxyl-terminal hydrolase 34; Belongs to the peptidase C19 family.
   
   0.717
MRFAP1
MORF4 family-associated protein 1.
      
 0.714
ARFGAP2
ADP-ribosylation factor GTPase-activating protein 2 isoform X1.
      
 0.714
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.