Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ASB4 | WDR6 | A0A2Y9H1P0 | A0A2Y9GTJ3 | Ankyrin repeat and SOCS box protein 4. | WD repeat-containing protein 6 isoform X1. | 0.745 |
FTSJ1 | NOP56 | A0A2Y9G984 | A0A2Y9H4B2 | Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. | Nucleolar protein 56. | 0.664 |
FTSJ1 | SNU13 | A0A2Y9G984 | A0A2Y9H042 | Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.451 |
FTSJ1 | UTP15 | A0A2Y9G984 | A0A2Y9HWD0 | Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. | U3 small nucleolar RNA-associated protein 15 homolog. | 0.526 |
FTSJ1 | WDR6 | A0A2Y9G984 | A0A2Y9GTJ3 | Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. | WD repeat-containing protein 6 isoform X1. | 0.973 |
FTSJ3 | NOP56 | A0A2Y9G8T8 | A0A2Y9H4B2 | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | Nucleolar protein 56. | 0.933 |
FTSJ3 | SNU13 | A0A2Y9G8T8 | A0A2Y9H042 | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.719 |
FTSJ3 | UTP15 | A0A2Y9G8T8 | A0A2Y9HWD0 | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | U3 small nucleolar RNA-associated protein 15 homolog. | 0.774 |
FTSJ3 | WDR6 | A0A2Y9G8T8 | A0A2Y9GTJ3 | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | WD repeat-containing protein 6 isoform X1. | 0.854 |
GPALPP1 | PTDSS1 | A0A2Y9HUK1 | A0A2Y9H1L9 | GPALPP motifs-containing protein 1. | Phosphatidylserine synthase 1. | 0.787 |
GPALPP1 | TBL2 | A0A2Y9HUK1 | A0A2Y9I1E6 | GPALPP motifs-containing protein 1. | Transducin beta-like protein 2. | 0.793 |
GPALPP1 | WDR6 | A0A2Y9HUK1 | A0A2Y9GTJ3 | GPALPP motifs-containing protein 1. | WD repeat-containing protein 6 isoform X1. | 0.798 |
MRM2 | NOP56 | A0A2Y9GCF8 | A0A2Y9H4B2 | rRNA methyltransferase 2, mitochondrial. | Nucleolar protein 56. | 0.671 |
MRM2 | SNU13 | A0A2Y9GCF8 | A0A2Y9H042 | rRNA methyltransferase 2, mitochondrial. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.632 |
MRM2 | UTP15 | A0A2Y9GCF8 | A0A2Y9HWD0 | rRNA methyltransferase 2, mitochondrial. | U3 small nucleolar RNA-associated protein 15 homolog. | 0.690 |
MRM2 | WDR6 | A0A2Y9GCF8 | A0A2Y9GTJ3 | rRNA methyltransferase 2, mitochondrial. | WD repeat-containing protein 6 isoform X1. | 0.882 |
NOP56 | FTSJ1 | A0A2Y9H4B2 | A0A2Y9G984 | Nucleolar protein 56. | Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs. | 0.664 |
NOP56 | FTSJ3 | A0A2Y9H4B2 | A0A2Y9G8T8 | Nucleolar protein 56. | pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. | 0.933 |
NOP56 | MRM2 | A0A2Y9H4B2 | A0A2Y9GCF8 | Nucleolar protein 56. | rRNA methyltransferase 2, mitochondrial. | 0.671 |
NOP56 | SNU13 | A0A2Y9H4B2 | A0A2Y9H042 | Nucleolar protein 56. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.999 |
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