STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPF2Zinc finger protein ubi-d4. (391 aa)    
Predicted Functional Partners:
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 0.973
SMARCD1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1.
   
 0.969
SMARCE1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1.
   
 0.964
SMARCC1
SWI/SNF complex subunit SMARCC1 isoform X1.
   
 0.928
ARID1B
AT-rich interactive domain-containing protein 1B.
    
 0.928
ARID1A
LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1A.
    
 0.915
SMARCD2
annotation not available
   
 0.908
SS18L1
Calcium-responsive transactivator.
    
 
 0.907
SMARCC2
SWI/SNF complex subunit SMARCC2.
   
 0.904
SMARCA2
Probable global transcription activator SNF2L2.
    
 0.886
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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