STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HARBI1Putative nuclease HARBI1. (349 aa)    
Predicted Functional Partners:
KIAA0391
Mitochondrial ribonuclease P protein 3.
      
 0.752
SHPK
Sedoheptulokinase.
      
 0.752
DOCK3
Dedicator of cytokinesis protein 3; Belongs to the DOCK family.
      
 0.720
PIGZ
Mannosyltransferase.
      
 0.719
CHPT1
Cholinephosphotransferase 1 isoform X1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.614
SORL1
Sortilin-related receptor.
    
 0.578
GALNT1
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.514
PTK7
Inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.503
NGF
Beta-nerve growth factor; Belongs to the NGF-beta family.
    
 0.482
NTF3
Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.
    
 0.482
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.