STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NFYBNuclear transcription factor Y subunit beta. (207 aa)    
Predicted Functional Partners:
NFYC
Nuclear transcription factor Y subunit gamma isoform X1.
   
 0.999
NFYA
Nuclear transcription factor Y subunit alpha.
   
 0.999
SPDYC
LOW QUALITY PROTEIN: speedy protein C.
   
 0.906
CHRAC1
Chromatin accessibility complex protein 1.
   
 0.906
LOC110587829
MHC class II transactivator-like.
     
 0.805
LOC110587828
MHC class II transactivator-like.
     
 0.805
HIKESHI
Protein Hikeshi.
   
  
 0.772
MTERF2
Transcription termination factor 2, mitochondrial.
   
    0.614
MTERF1
Transcription termination factor 1, mitochondrial.
   
    0.614
POLE4
DNA polymerase epsilon subunit 4.
    
 
 0.584
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.