STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RDH10Retinol dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (341 aa)    
Predicted Functional Partners:
ALDH1A2
Retinal dehydrogenase 2 isoform X1; Belongs to the aldehyde dehydrogenase family.
   
 0.981
ALDH1A3
Aldehyde dehydrogenase family 1 member A3; Belongs to the aldehyde dehydrogenase family.
   
 0.962
ALDH1A1
Retinal dehydrogenase 1; Belongs to the aldehyde dehydrogenase family.
   
 0.955
LOC110589518
Cytochrome P450 26A1; Belongs to the cytochrome P450 family.
   
 
 0.955
LRAT
Lecithin retinol acyltransferase.
     
 0.952
RLBP1
Retinaldehyde-binding protein 1.
    
 0.945
BCO1
LOW QUALITY PROTEIN: beta,beta-carotene 15,15'-dioxygenase.
   
 
 0.944
RDH5
11-cis retinol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
0.939
PNPLA4
Patatin-like phospholipase domain-containing protein 4.
     
 0.927
LOC110591947
LOW QUALITY PROTEIN: aldehyde oxidase 4-like.
     
 0.926
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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