STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF182E3 ubiquitin-protein ligase RNF182. (247 aa)    
Predicted Functional Partners:
TBC1D30
TBC1 domain family member 30.
      
 0.774
LHFPL2
Lipoma HMGIC fusion partner-like 2 protein.
      
 0.762
NRIP3
Nuclear receptor-interacting protein 3.
   
  
 0.736
OCIAD2
OCIA domain-containing protein 2 isoform X1.
      
 0.725
ARHGAP12
Rho GTPase-activating protein 12 isoform X1.
     
 0.680
RAB3C
Ras-related protein Rab-3C.
      
 0.620
SYTL2
Synaptotagmin-like protein 2 isoform X1.
    
 0.616
RASD1
Dexamethasone-induced Ras-related protein 1.
    
 0.556
RNF186
RING finger protein 186.
      
 0.538
LOC110583306
Zinc transporter ZIP6.
      
 0.529
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.