STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGIF2Homeobox protein TGIF2. (237 aa)    
Predicted Functional Partners:
TGIF1
Homeobox protein TGIF1.
  
  
 
0.927
SMAD3
Mothers against decapentaplegic homolog.
    
 0.919
SMAD2
Mothers against decapentaplegic homolog.
    
 0.818
LOC110583310
Mothers against decapentaplegic homolog.
    
 0.818
GAS7
Growth arrest-specific protein 7 isoform X1.
    
 0.517
SMAD4
Mothers against decapentaplegic homolog.
    
 0.503
PPIG
Peptidyl-prolyl cis-trans isomerase G isoform X1.
   
  
 0.479
MAPK4
Mitogen-activated protein kinase 4 isoform X1.
      
 0.473
VGLL4
Transcription cofactor vestigial-like protein 4 isoform X1.
      
 0.471
EDF1
Endothelial differentiation-related factor 1.
      
 0.459
Your Current Organism:
Neomonachus schauinslandi
NCBI taxonomy Id: 29088
Other names: Hawaiian monk seal, Monachus schauinslandi, N. schauinslandi
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.